Journal of Applied Bioinformatics & Computational BiologyISSN: 2329-9533

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Citiation Applied bioinformatics computational biology

Articles published in Journal of Applied Bioinformatics & Computational Biology have been cited by esteemed scholars and scientists all around the world. Journal of Applied Bioinformatics & Computational Biology has got h-index 7, which means every article in Journal of Applied Bioinformatics & Computational Biology has got 7 average citations.

Following are the list of articles that have cited the articles published in Journal of Applied Bioinformatics & Computational Biology.

  2022 2021 2020 2019 2018

Year wise published articles

35 61 26 18 18

Year wise citations received

24 28 34 47 59
Journal total citations count 305
Journal Impact Factor 0.61
Journal 5 years Impact Factor 0.61
Journal CiteScore 1.03
Journal h-index 7
Journal h-index since 2017 6

Kaskova ZM, Tsarkova AS, Yampolsky IV (2016) 1001 lights luciferins, luciferases, their mechanisms of action and applications in chemical analysis, biology and medicine. Chemical Society Reviews 45: 6048-6077.

Osipova Zm, Synthesis of Luciferin, Oxyluciferin and their Analogues for Studying the Mechanisms of Bioluminescence of the Soil Worm Fridericia Heliota and Higher Fungi.

Shaiek R, Raboudi F, Ayadi N, Aloui S, Salghi R, et al. (2015) Structural modeling of plant secondary metabolites characterized by an inhibitory potential of insect enzymes. J Appl Bioinform Comput Biol

Ovchinnikov EL, AdyshirinZade KA, Romashova NA, Vladimirova TY, Minaeva TI (2015) Applied Bioinformatics in Research of Hearing and Methods of Mathematical Analysis in Establishment of Distribution of Acoustical Receptors on Frequencies.

Ovchinnikov EL, AdyshirinZade KA, Romashova NA, Vladimirova TY, Minaeva (2015) Applied bioinformatics in the study of hearing and Statistical methods in substantiating the distribution of auditory receptors for perceived frequencies. Trends of Science and Education in the Contemporary World 1: 11-14

Ovchinnikov EL, AdyshirinZade KA, Romashova NA, Vladimirova TY, Minaeva (2016) Computer Inner Ear Biology and Corti’s Organ and the Structure Definition as Effective Parts of the Cochlear Duct.

Ovchinnikov EL, AdyshirinZade KA, Romashova NA, Vladimirova TY, Minaeva TI (2016) Hearing Receptors and Internal Hair Cells and the Structurally and Functional Organization. 

Ovchinnikov EL, AdyshirinZade KA, Romashova NA, Vladimirova TY, Minaeva TI Computer Biology of the Internal Ear and Apical Ligament of Cochlear Duct Membranes, Calculation of Axial Parameters.

Ovchinnikov EL, AdyshirinZade KA, Romashova NA, Vladimirova TY, Minaeva TI (2015) Applied Bioinformatics in Research of Hearing and W. Koenig A New Frequency Scale In Distributions of Acoustical Receptors on the Perceived Frequencies.

Ovchinnikov EL, Adyshirin Zade KA, Alexandrova NN (2016) Frequent Perception of Sound and Height of Tones in Physics. Science and Education in the Modern World. Collection of Scientific Papers.

Ovchinnikov EL, AdyshirinZade KA, Romashova NA, Vladimirova TY, Minaeva TI (2016) Computer Biology Of The Inner Ear and Cortic Organ. Definition of Structure as an Effective Part of the Sleep Protection

Ovchinnikov EL, AdyshirinZade KA, Romashova NA, Vladimirova TY, Minaeva TI (2015) Computer Biology of the Internal Ear and Noninvasive Calculation of Cochlear Duct Length.

Ovchinnikov EL, AdyshirinZade KA, Romashova NA, Vladimirova TY, Minaeva TI (2015) Applied Bioinformatics in Hearing Research and Statistical Methods in Substan-Tiation of Acoustical Receptors Distribution on the Perceived Frequencies.

Ovchinnikov EL, Adyshirin Zade KA, Romashova NA, Vladimirova TYu, Minaeva TI (2015) Computer Biology of the Inner Ear and Effective Length of the Snail Protot and its Structures.

Ovchinnikov EL, Adyshirin Zade KA, Romashova NA, Vladimirova TYu, Minaeva TI (2015) Computer Biology of the Internal Ear and Apical Ligament of Cochlear Duct Membranes, Noninvasive Calculation of Axial Parameters.

Yashin SS, Shiryazdanov RW, Koldomasov IV, Tarasenko DS, Davydkin Gogel MM, Drob VV (2016) the Weber-Ovchinnikov Law.

Sankarasubramanian J, Pavithra KB, Kavitha B (2015) Identification of potent inhibitor for RNA dependent RNA polymerase (RDRP) of dengue virus serotype-3 a molecular docking study. J Appl Bioinform Comput Biol 4: 1-2.

Kirkpatrick CL, Martins D, Redder P, Frandi A, Mignolet J, et al. (2016) Growth control switch by a DNA-damage-inducible toxin–antitoxin system in Caulobacter crescentus. Nature microbiology 1: 16008.

Prados J, Linder P, Redder P (2016) TSS-EMOTE, a refined protocol for a more complete and less biased global mapping of transcription start sites in bacterial pathogens. BMC genomics 17: 849.

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Taghiyari, H. R. (2014). Effects of nanosilver-impregnation and alfalfa-intercropping on fluid transfer in downy black poplar wood. Maderas. Ciencia y tecnología, 16(1), 49-62.
Taghiyari, H. R., Ghorbani, M., & Kalantari, A. (2013). Effects of silver and copper nanoparticles on gas and liquid permeability of heat-treated solid woods. Special Topics & Reviews in Porous Media: An International Journal, 4(1).
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Abuín, J. M., Pichel, J. C., Pena, T. F., & Amigo, J. (2016). SparkBWA: speeding up the alignment of high-throughput DNA sequencing data. PloS one, 11(5), e0155461.
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Yin, Z., Lan, H., Tan, G., Lu, M., Vasilakos, A. V., & Liu, W. (2017). Computing platforms for big biological data analytics: perspectives and challenges. Computational and structural biotechnology journal, 15, 403-411.
Gonzalez-Dominguez, J., Liu, Y., & Schmidt, B. (2016). Parallel and scalable short-read alignment on multi-core clusters using UPC++. PloS one, 11(1), e0145490.
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Brinda, K. (2016). Novel computational techniques for mapping and classification of Next-Generation Sequencing data (Doctoral dissertation, Université Paris-Est).
Duan, X., Xu, K., Chan, Y., Hundt, C., Schmidt, B., Balaji, P., & Liu, W. (2017, September). S-aligner: Ultrascalable read mapping on sunway taihu light. In 2017 IEEE International Conference on Cluster Computing (CLUSTER) (pp. 36-46). IEEE.
Duan, X., Xu, K., Chan, Y., Hundt, C., Schmidt, B., Balaji, P., & Liu, W. (2017, September). S-aligner: Ultrascalable read mapping on sunway taihu light. In 2017 IEEE International Conference on Cluster Computing (CLUSTER) (pp. 36-46). IEEE.
Rostovskaya, M., Donsante, S., Sacchetti, B., Alexopoulou, D., Klemroth, S., Dahl, A., ... & Anastassiadis, K. (2018). Clonal analysis delineates transcriptional programs of osteogenic and adipogenic lineages of adult mouse skeletal progenitors. Stem cell reports, 11(1), 212-227.
Li, J., Zhou, H., & Wang, W. (2006, December). Gradual cube: Customize profile on mobile olap. In Sixth International Conference on Data Mining (ICDM'06) (pp. 943-947). IEEE.
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González-Domínguez, J., Hundt, C., & Schmidt, B. (2018). parSRA: A framework for the parallel execution of short read aligners on compute clusters. Journal of Computational Science, 25, 134-139.
Chen, S., & Senar, M. A. (2019). Exploring efficient data parallelism for genome read mapping on multicore and manycore architectures. Parallel Computing, 87, 11-24.
Shi, L., & Wang, Z. (2019). Computational strategies for scalable genomics analysis. Genes, 10(12), 1017.
Rengasamy, V., & Madduri, K. (2016, June). SPRITE: a fast parallel SNP detection pipeline. In International Conference on High Performance Computing (pp. 159-177). Springer, Cham.
Zhang, Q., Kremer-Herman, N., Tovar, B., & Thain, D. (2018, November). Reduction of Workflow Resource Consumption Using a Density-based Clustering Model. In 2018 IEEE/ACM Workflows in Support of Large-Scale Science (WORKS) (pp. 1-9). IEEE.
Zhang, G. L., Li, B., & Schlichtmann, U. (2018, July). Timing with Virtual Signal Synchronization for Circuit Performance and Netlist Security. In 2018 IEEE Computer Society Annual Symposium on VLSI (ISVLSI) (pp. 715-718). IEEE.
Rengasamy, V. (2018). Engineering High Performance Workflows for End-to-End Acceleration of Genomic Applications. The Pennsylvania State University.
Zou, Y., Zhu, Y., Li, Y., Wu, F. X., & Wang, J. (2021). Parallel computing for genome sequence processing. Briefings in Bioinformatics.
Makris, A., Michail, D., Varlamis, I., Dimitropoulos, C., Tserpes, K., Tsatsaronis, G., ... & Sawyer, M. (2017, July). Parallelization of large-scale Drug-Protein binding experiments. In 2017 International Conference on High Performance Computing & Simulation (HPCS) (pp. 201-208). IEEE.
Jacquemin, J., Hohmann, N., Buti, M., Selvaggi, A., Müller, T., Koch, M. A., & Schmid, K. J. (2016). Levels and patterns of genetic diversity differ between two closely related endemic Arabidopsis species. BioRxiv, 048785.
Ahmad, T., Al Ars, Z., & Hofstee, H. P. (2021). VC@ Scale: Scalable and high-performance variant calling on cluster environments. GigaScience, 10(9), giab057.
Xia, Z., Cui, Y., Zhang, A., Tang, T., Peng, L., Huang, C., ... & Liao, X. (2021). A Review of Parallel Implementations for the Smith–Waterman Algorithm. Interdisciplinary Sciences: Computational Life Sciences, 1-14.
Alsulaiman, T., Osia, B., Malkova, A., & Oliveira, S. (2017, October). Concurrent MMBIRFinder. In 2017 IEEE 7th International Conference on Computational Advances in Bio and Medical Sciences (ICCABS) (pp. 1-6). IEEE.
Abuín Mosquera, J. M., Pichel Campos, J. C., Fernández Pena, A. T., & Amigo Lechuga, J. (2016). SparkBWA: Speeding Up the Alignment of High-Throughput DNA Sequencing Data.
Xu, K., Duan, X., Meng, X., Li, X., Schmidt, B., & Liu, W. (2020, August). SWMapper: Scalable Read Mapper on SunWay TaihuLight. In 49th International Conference on Parallel Processing-ICPP (pp. 1-10).
Xu, K., Duan, X., Meng, X., Li, X., Schmidt, B., & Liu, W. (2020, August). SWMapper: Scalable Read Mapper on SunWay TaihuLight. In 49th International Conference on Parallel Processing-ICPP (pp. 1-10).
Liang, Z., Zhou, P., Wang, Y., Zhang, Y., Li, D., Su, X., ... & Wang, W. (2021). Pulmonary Adenofibroma: Clinicopathological and Genetic Analysis of 7 Cases With Literature Review. Frontiers in Oncology, 2613.
Ndzi, E. N., Nkenfou, C. N., Mekue, L. M., Zentilin, L., Tamgue, O., Pefura, E. W. Y., ... & Ndjolo, A. (2019). MicroRNA hsa-miR-29a-3p is a plasma biomarker for the differential diagnosis and monitoring of tuberculosis. Tuberculosis, 114, 69-76.
Ndzi, E. N., Nkenfou, C. N., Mekue, L. M., Zentilin, L., Tamgue, O., Pefura, E. W. Y., ... & Ndjolo, A. (2019). MicroRNA hsa-miR-29a-3p is a plasma biomarker for the differential diagnosis and monitoring of tuberculosis. Tuberculosis, 114, 69-76.
Ndzi, E. N., Viswanath, A. N. I., Adzemye, N. G., Tamgue, O., Nsongka, M. V., Nair, A. S., & Nkenfou, C. N. (2019). Upregulated bovine tuberculosis microRNAs trigger oncogenic pathways: an In silico perception. International journal of mycobacteriology, 8(1), 70.
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Andújar, I., Gómez, D., Pérez, L., Vicente, O., & Lorenzo, J. C. (2019). Auxins, auxin transport inhibitors, and competitors for auxin receptors do not show statistically significant differences in 212 molecular descriptors. Romanian Biotechnological Letters, 24(3), 407-411.
Ndzi, E. N., Nkenfou, C. N., Mekue, L. M., Zentilin, L., Tamgue, O., Pefura, E. W. Y., ... & Ndjolo, A. (2019). MicroRNA hsa-miR-29a-3p is a plasma biomarker for the differential diagnosis and monitoring of tuberculosis. Tuberculosis, 114, 69-76.
Andújar, I., Gómez, D., Pérez, L., & Lorenzo, J. C. (2019). Chemo-Informatic Comparison of Gibberellins and Anti-Gibberellins. J Pharm Drug Res, 2(1), 54-63.
Andújar, I., Gómez, D., Pérez, L., & Lorenzo, J. C. (2019). Terminal secondary C (sp3), aliphatic secondary C (sp2), aliphatic tertiary C (sp2), primary amine (aliphatic), ring secondary C (sp3) and imidazole numbers can be used to discriminate between cytokinins and cytokinin antagonists. Plant Cell, Tissue and Organ Culture (PCTOC), 138(1), 207-213.
Ogunwa, T. H. (2018). Computer-aided modeling of interaction between aldehyde dehydrogenase and Garcinia biflavonoids. International Journal of Computer Applications, 975, 8887.
Ogunwa, T. H., Fasimoye, R. Y., & Adeyelu, T. T. (2019). Studies on the interaction mechanisms of Garcinia kolaviron constituents with selected diabetes and neurodegenerative disease targets. Journal of Proteins and Proteomics, 10(3), 221-234.
Torkamaneh, D., Boyle, B., St-Cyr, J., Légaré, G., Pomerleau, S., & Belzile, F. (2020). NanoGBS: a miniaturized procedure for GBS library preparation. Frontiers in genetics, 11, 67.
Torkamaneh, D., Laroche, J., Boyle, B., & Belzile, F. (2020). DepthFinder: a tool to determine the optimal read depth for reduced-representation sequencing. Bioinformatics, 36(1), 26-32.
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Ashraf, J., Mughal, E. U., Alsantali, R. I., Obaid, R. J., Sadiq, A., Naeem, N., ... & Ahmed, S. A. (2021). Structure-based designing and synthesis of 2-phenylchromone derivatives as potent tyrosinase inhibitors: In vitro and in silico studies. Bioorganic & Medicinal Chemistry, 35, 116057.
Zafar, W., Sumrra, S. H., & Chohan, Z. H. (2021). A Review: Pharmacological Aspects of Metal Based 1, 2, 4-Triazole Derived Schiff Bases. European Journal of Medicinal Chemistry, 113602.
Dimova, V., Jankulovska, M. S., & Jankulovska, M. A QUANTUM CHEMICAL INVESTIGATION OF N1-SUBSTITUTED 1, 2, 4-TRIAZOLE.
Alsantali, R. I., Mughal, E. U., Naeem, N., Alsharif, M. A., Sadiq, A., Ali, A., ... & Ahmed, S. A. (2021). Flavone-based Hydrazones as New Tyrosinase Inhibitors: Synthetic Imines with Emerging Biological Potential, SAR, Molecular Docking and Drug-likeness Studies. Journal of Molecular Structure, 131933.
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Ahmadi, R., Sepehri, B., & Ghavami, R. (2019). Development linear and non-linear QSAR models for predicting AXL kinase inhibitory activity of N-[4-(quinolin-4-yloxy) phenyl] benzenesulfonamides. Journal of Receptors and Signal Transduction, 39(3), 264-275.
Shrestha, S., Gurung, D. B., & Gokul, K. C. (2021). Mathematical modeling of temperature variation in breast tissue with and without tumor/cyst during menstrual cycle. Mathematical Modeling and Computing, 8, 192-202.
SHRESTHA, S., KC, G., & GURUNG, D. B. MATHEMATICAL STUDY OF TWO-DIMENSIONAL TEMPERATURE VARIATION IN TUMOR EMBEDDED BREAST TISSUE.
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Kati, Y. E., Wang, S. L., & Kharroubi, F. A Novel Approach for Detecting Driver Mutated Pathways in Glioblastoma Multiform.
Kim, H., & Han, H. (2018). Computer-Aided Multi-Target Management of Emergent Alzheimer's Disease. Bioinformation, 14(4), 167.
Zhang, H. J., Mitchell, S., Fang, Y. H., Tsai, H. M., Piao, L., Ousta, A., ... & Sharp, W. W. (2021). Assessment of Brain Glucose Metabolism Following Cardiac Arrest by [18 F] FDG Positron Emission Tomography. Neurocritical care, 34(1), 64-72.
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Heidari, A. (2017). A comparative computational and experimental study on different vibrational biospectroscopy methods, techniques and applications for human cancer cells in tumor tissues simulation, modeling, research, diagnosis and treatment. Open J Anal Bioanal Chem, 1(1), 014-020.
Heidari, A. (2017). A novel and modern experimental imaging and spectroscopy comparative study on malignant and benign human cancer cells and tissues with the passage of time under white synchrotron radiation. Cancer Sci Res Open Access, 4(2), 1-8.
Gobato, R., & Heidari, A. (2018). Molecular mechanics and quantum chemical study on sites of action of sanguinarine using vibrational spectroscopy based on molecular mechanics and quantum chemical calculations. Malaysian Journal of Chemistry, 20(1), 1-23.
Heidari, A. (2017). Overview of the role of vitamins in reducing negative effect of decapeptyl (triptorelin acetate or pamoate salts) on prostate cancer cells and tissues in prostate cancer treatment process through transformation of malignant prostate tumors into benign prostate tumors under synchrotron radiation. Open J Anal Bioanal Chem, 1(1), 021-026.

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